ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5j7fC1 - ECOD Domain | ECOD

ECOD/Domains/e5j7fC1

e5j7fC1

UID: 002075116

PDB

Range: C:11-111
PDB: 5J7F chain C(all domains)
UniProt: Q00987 (all domains)
Gene: MDM2

Molecule: E3 ubiquitin-protein ligase Mdm2

3D Structure

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Related Domains

Browse other domains in SWIB →

Classification

AArchitecturealpha arrays(a.6)

XX-groupSWIB/MDM2 domain(178)

HH-groupSWIB/MDM2 domain(178.1)

TT-groupSWIB/MDM2 domain(178.1.1)

FFamilySWIB(178.1.1.1)

Ligands

in contact, ≤ 4 Å

4-({6-[(6-chloro-3-{1-[(4-chlorophenyl)methyl]-4-(4-fluorophenyl)-1H-imidazol-5-yl}-1H-indole-2-carbonyl)oxy]hexyl}amino)-4-oxobutanoic acid6GG

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SWIB/MDM2 domain

ClanCL0906SWIB

External Links

ECOD PDB View: 5J7F RCSB PDB: 5J7F PDBe: 5J7F UniProt: Q00987

Downloads

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