ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5m5jB2 - ECOD Domain | ECOD

ECOD/Domains/e5m5jB2

e5m5jB2

UID: 002075232

PDB

Range: B:3-120,B:243-314
PDB: 5M5J chain B(all domains)
UniProt: E2RU27 (all domains)
Gene: GL50803_009827

Molecule: Thioredoxin reductase

3D Structure

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Related Domains

Browse other domains in Pyr_redox_2 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupFAD/NAD(P)-binding domain(2003.1.2)

FFamilyPyr_redox_2(2003.1.2.24)

Ligands

in contact, ≤ 4 Å

Flavin adenine dinucleotideFAD
drugDrugBank DB03147
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07992Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5M5J RCSB PDB: 5M5J PDBe: 5M5J UniProt: E2RU27

Downloads

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