ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mv0C1 - ECOD Domain | ECOD

ECOD/Domains/e5mv0C1

e5mv0C1

UID: 002075265

PDB

Range: C:1-193
PDB: 5MV0 chain C(all domains)
UniProt: J7HBG8 (all domains)
Gene: L

Molecule: L protein

3D Structure

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Related Domains

Browse other domains in ArenaCapSnatch →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyArenaCapSnatch(2008.1.1.66)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17296ArenaCapSnatch

Arenavirus cap snatching domain

ClanCL0236PDDEXK

External Links

ECOD PDB View: 5MV0 RCSB PDB: 5MV0 PDBe: 5MV0 UniProt: J7HBG8

Downloads

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