ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n35A1 - ECOD Domain | ECOD

ECOD/Domains/e5n35A1

e5n35A1

UID: 002075277

RepresentativePDB

Range: A:11-70
PDB: 5N35 chain A(all domains)
UniProt: A0A0E3GTJ4 (all domains)
Gene: HFC64_14550

Molecule: PolB1 Binding Protein 2 (PBP2)

3D Structure

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Related Domains

Browse other domains in DUF6995 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyDUF6995(101.1.2.234)

Ligands

in contact, ≤ 4 Å

Gadolinium atomGD
metal

+ 2 additives (Glycerin, Nitrate)

GlycerinGOL
DrugBank DB09462
Nitrate

Pfam Families

PolB1 Binding Protein 2

ClanCL0123HTH

External Links

ECOD PDB View: 5N35 RCSB PDB: 5N35 PDBe: 5N35 UniProt: A0A0E3GTJ4

Downloads

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DrugBank DB14049

Shown in the structure viewer. Drug annotations from DrugDomain.