ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uljB1 - ECOD Domain | ECOD

ECOD/Domains/e5uljB1

e5uljB1

UID: 002075459

PDB

Range: B:1-394
PDB: 5ULJ chain B(all domains)
UniProt: A3LNL5 (all domains)
Gene: RAI1

Molecule: RAI1

3D Structure

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Related Domains

Browse other domains in RAI1 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRestriction endonuclease-like(2008)

HH-groupRestriction endonuclease-like(2008.1)

TT-groupRestriction endonuclease-like(2008.1.1)

FFamilyRAI1(2008.1.1.27)

Ligands

in contact, ≤ 4 Å

[[(2R,3S,4R,5R)-5-(3-aminocarbonyl-4H-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate0WD
Calcium ionCA
metal

Shown in the structure viewer. Drug annotations from .

Pfam Families

RAI1 like PD-(D/E)XK nuclease

ClanCL0236PDDEXK

External Links

ECOD PDB View: 5ULJ RCSB PDB: 5ULJ PDBe: 5ULJ UniProt: A3LNL5

Downloads

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