ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vf9B1 - ECOD Domain | ECOD

ECOD/Domains/e5vf9B1

e5vf9B1

UID: 002075490

PDB

Range: B:84-198
PDB: 5VF9 chain B(all domains)
UniProt: P04179 (all domains)
Gene: SOD2

Molecule: Superoxide dismutase [Mn], mitochondrial

3D Structure

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Related Domains

Browse other domains in Sod_Fe_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupFe,Mn superoxide dismutase (SOD)-C(228)

HH-groupFe,Mn superoxide dismutase (SOD)-C(228.1)

TT-groupFe,Mn superoxide dismutase (SOD)-C(228.1.1)

FFamilySod_Fe_C(228.1.1.1)

Ligands

in contact, ≤ 4 Å

MANGANESE (II) IONMN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02777Sod_Fe_C

Iron/manganese superoxide dismutases, C-terminal domain

External Links

ECOD PDB View: 5VF9 RCSB PDB: 5VF9 PDBe: 5VF9 UniProt: P04179

Downloads

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