ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xbfB1 - ECOD Domain | ECOD

ECOD/Domains/e5xbfB1

e5xbfB1

UID: 002075794

PDB

Range: B:432-552
PDB: 5XBF chain B(all domains)
UniProt: Q9Y6N9 (all domains)
Gene: USH1C

Molecule: Harmonin

3D Structure

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Related Domains

Browse other domains in PDZ →

Classification

AArchitecturebeta barrels(a.1)

XX-groupPDZ domain(7)

HH-groupPDZ domain(7.1)

TT-groupPDZ domain(7.1.1)

FFamilyPDZ(7.1.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PDZ domain

ClanCL0466PDZ-like

External Links

ECOD PDB View: 5XBF RCSB PDB: 5XBF PDBe: 5XBF UniProt: Q9Y6N9

Downloads

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