ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e1rkqB2 - ECOD Domain | ECOD

ECOD/Domains/e1rkqB2

e1rkqB2

UID: 002076129

PDB

Range: B:1-87,B:195-271
PDB: 1RKQ chain B(all domains)
UniProt: P0A8Y5 (all domains)
Gene: yidA

Molecule: Hypothetical protein yidA

3D Structure

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Related Domains

Browse other domains in Hydrolase_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamilyHydrolase_3(2006.1.1.11)

Ligands

in contact, ≤ 4 Å

Chloride ionCL
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF08282Hydrolase_3

haloacid dehalogenase-like hydrolase

ClanCL0137HAD

External Links

ECOD PDB View: 1RKQ RCSB PDB: 1RKQ PDBe: 1RKQ UniProt: P0A8Y5

Downloads

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