ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4umdA1 - ECOD Domain | ECOD

ECOD/Domains/e4umdA1

e4umdA1

UID: 002076183

PDB

Range: A:1-173
PDB: 4UMD chain A(all domains)
UniProt: A0A0J9X241 (all domains)

Molecule: 3-DEOXY-D-MANNO-OCTULOSONATE 8-PHOSPHATE PHOSPHATASE KDSC

3D Structure

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Related Domains

Browse other domains in haloacid dehalogenase-like hydrolase / haloacid dehalogenase-like hydrolase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamilyhaloacid dehalogenase-like hydrolase / haloacid dehalogenase-like hydrolase(2006.1.1.2)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Citric acid)

Citric acidCIT
DrugBank DB04272

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00702Hydrolase

haloacid dehalogenase-like hydrolase

ClanCL0137HAD

PF08282Hydrolase_3

haloacid dehalogenase-like hydrolase

ClanCL0137HAD

External Links

ECOD PDB View: 4UMD RCSB PDB: 4UMD PDBe: 4UMD UniProt: A0A0J9X241

Downloads

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