ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nxdA1 - ECOD Domain | ECOD

ECOD/Domains/e5nxdA1

e5nxdA1

UID: 002077288

PDB

Range: A:330-477,A:510-632
PDB: 5NXD chain A(all domains)
UniProt: P53671 (all domains)
Gene: LIMK2

Molecule: LIM domain kinase 2

3D Structure

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Related Domains

Browse other domains in PK_Tyr_Ser-Thr →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPK_Tyr_Ser-Thr(206.1.1.20)

Ligands

in contact, ≤ 4 Å

4-[(3-chlorophenyl)sulfamoyl]-~{N}-(phenylmethyl)-~{N}-propyl-benzamide9D8

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07714PK_Tyr_Ser-Thr

Protein tyrosine and serine/threonine kinase

ClanCL0016PKinase

External Links

ECOD PDB View: 5NXD RCSB PDB: 5NXD PDBe: 5NXD UniProt: P53671

Downloads

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