ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5nxdB1 - ECOD Domain | ECOD

ECOD/Domains/e5nxdB1

e5nxdB1

UID: 002077289

PDB

Range: B:330-477,B:510-632
PDB: 5NXD chain B(all domains)
UniProt: P53671 (all domains)
Gene: LIMK2

Molecule: LIM domain kinase 2

3D Structure

Loading viewer...

Related Domains

Browse other domains in PK_Tyr_Ser-Thr →

Classification

AArchitecturea+b complex topology(a.14)

XX-groupProtein kinase/SAICAR synthase/ATP-grasp(206)

HH-groupProtein kinase/SAICAR synthase/ATP-grasp(206.1)

TT-groupProtein kinase(206.1.1)

FFamilyPK_Tyr_Ser-Thr(206.1.1.20)

Ligands

in contact, ≤ 4 Å

4-[(3-chlorophenyl)sulfamoyl]-~{N}-(phenylmethyl)-~{N}-propyl-benzamide9D8

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07714PK_Tyr_Ser-Thr

Protein tyrosine and serine/threonine kinase

ClanCL0016PKinase

External Links

ECOD PDB View: 5NXD RCSB PDB: 5NXD PDBe: 5NXD UniProt: P53671

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure