ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5v56A2 - ECOD Domain | ECOD

ECOD/Domains/e5v56A2

e5v56A2

UID: 002077495

RepresentativePDB

Range: A:431-1137
PDB: 5V56 chain A(all domains)
UniProt: P00323 (all domains)
Gene: DVU_2680

Molecule: Smoothened homolog,Flavodoxin,Smoothened homolog

3D Structure

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Related Domains

Browse other domains in Flavodoxin_1 →

Classification

AArchitecturealpha bundles(a.7)

XX-groupFour-helical up-and-down bundle(601)

HH-groupCytochromes(601.2)

TT-groupCytochromes(601.2.1)

FFamilyFlavodoxin_1(601.2.1.3)

Ligands

in contact, ≤ 4 Å

Flavin mononucleotideFMN
drugDrugBank DB03247
N-AcetylglucosamineNAG
drugDrugBank DB00141within 5 Å only

Pfam Families

PF00258Flavodoxin_1

Flavodoxin

ClanCL0042Flavoprotein

External Links

ECOD PDB View: 5V56 RCSB PDB: 5V56 PDBe: 5V56 UniProt: P00323

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

N-methyl-N-[1-[4-(2-methylpyrazol-3-yl)phthalazin-1-yl]piperidin-4-yl]-4-nitro-2-(trifluoromethyl)benzamide836

within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.