ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vmkB1 - ECOD Domain | ECOD

ECOD/Domains/e5vmkB1

e5vmkB1

UID: 002077570

PDB

Range: B:3-248
PDB: 5VMK chain B(all domains)
UniProt: B0VPT6 (all domains)
Gene: glmU

Molecule: Bifunctional protein GlmU

3D Structure

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Related Domains

Browse other domains in NTP_transf_3 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupNucleotide-diphospho-sugar transferases(7516)

HH-groupNucleotide-diphospho-sugar transferases(7516.1)

TT-groupNucleotide-diphospho-sugar transferases(7516.1.1)

FFamilyNTP_transf_3(7516.1.1.24)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Tetraethylene glycol)

Tetraethylene glycolPG4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF12804NTP_transf_3

MobA-like NTP transferase domain

ClanCL0110GT-A

External Links

ECOD PDB View: 5VMK RCSB PDB: 5VMK PDBe: 5VMK UniProt: B0VPT6

Downloads

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