ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vrvA1 - ECOD Domain | ECOD

ECOD/Domains/e5vrvA1

e5vrvA1

UID: 002077661

PDB

Range: A:655-783,A:803-865
PDB: 5VRV chain A(all domains)
UniProt: A9CHP8 (all domains)
Gene: lpiA

Molecule: Protein regulated by acid pH

3D Structure

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Related Domains

Browse other domains in LPG_synthase_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyLPG_synthase_C(213.1.1.21)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09924LPG_synthase_C

Phosphatidylglycerol lysyltransferase, C-terminal

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 5VRV RCSB PDB: 5VRV PDBe: 5VRV UniProt: A9CHP8

Downloads

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