ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vrvC1 - ECOD Domain | ECOD

ECOD/Domains/e5vrvC1

e5vrvC1

UID: 002077665

PDB

Range: C:655-783,C:803-864
PDB: 5VRV chain C(all domains)
UniProt: A9CHP8 (all domains)
Gene: lpiA

Molecule: Protein regulated by acid pH

3D Structure

Loading viewer...

Related Domains

Browse other domains in LPG_synthase_C →

Classification

AArchitecturea+b three layers(a.12)

XX-groupNat/Ivy(213)

HH-groupAcyl-CoA N-acyltransferases (Nat)(213.1)

TT-groupAcyl-CoA N-acyltransferases (Nat)(213.1.1)

FFamilyLPG_synthase_C(213.1.1.21)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF09924LPG_synthase_C

Phosphatidylglycerol lysyltransferase, C-terminal

ClanCL0257Acetyltrans

External Links

ECOD PDB View: 5VRV RCSB PDB: 5VRV PDBe: 5VRV UniProt: A9CHP8

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure