ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bkmB1 - ECOD Domain | ECOD

ECOD/Domains/e4bkmB1

e4bkmB1

UID: 002079460

PDB

Range: B:0-87,B:223-303
PDB: 4BKM chain B(all domains)
UniProt: P60487 (all domains)
Gene: Pdxp

Molecule: PYRIDOXAL PHOSPHATE PHOSPHATASE, PHOSPHOGLYCOLATE PHOSPHATASE, PYRIDOXAL PHOSPHATE PHOSPHATASE

3D Structure

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Related Domains

Browse other domains in Hydrolase_like,Hydrolase_6 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupHAD-like(2006.1.1)

FFamilyHydrolase_like,Hydrolase_6(2006.1.1.16)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13242Hydrolase_like

HAD-hyrolase-like

ClanCL0137HAD

PF13344Hydrolase_6

Haloacid dehalogenase-like hydrolase

ClanCL0137HAD

External Links

ECOD PDB View: 4BKM RCSB PDB: 4BKM PDBe: 4BKM UniProt: P60487

Downloads

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