ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4bpbA2 - ECOD Domain | ECOD

ECOD/Domains/e4bpbA2

e4bpbA2

UID: 002079467

PDB

Range: A:796-921
PDB: 4BPB chain A(all domains)
UniProt: O95786 (all domains)
Gene: RIGI

Molecule: PROBABLE ATP-DEPENDENT RNA HELICASE DDX58

3D Structure

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Related Domains

Browse other domains in RIG-I_C-RD →

Classification

AArchitecturebeta complex topology(a.5)

XX-groupETN0001 domain-like(708)

HH-groupETN0001 domain-like(708.1)

TT-groupMss4-like(708.1.2)

FFamilyRIG-I_C-RD(708.1.2.7)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF11648RIG-I_C-RD

C-terminal domain of RIG-I

ClanCL0080Beta-tent

External Links

ECOD PDB View: 4BPB RCSB PDB: 4BPB PDBe: 4BPB UniProt: O95786

Downloads

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