ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5n41A1 - ECOD Domain | ECOD

ECOD/Domains/e5n41A1

e5n41A1

UID: 002080107

PDB

Range: A:11-70
PDB: 5N41 chain A(all domains)
UniProt: A0A0E3GTJ4 (all domains)
Gene: HFC64_14550

Molecule: PolB1 Binding Protein 2

3D Structure

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Related Domains

Browse other domains in DUF6995 →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupwinged helix domain(101.1.2)

FFamilyDUF6995(101.1.2.234)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PolB1 Binding Protein 2

ClanCL0123HTH

External Links

ECOD PDB View: 5N41 RCSB PDB: 5N41 PDBe: 5N41 UniProt: A0A0E3GTJ4

Downloads

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