ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nrtA1 - ECOD Domain | ECOD

ECOD/Domains/e5nrtA1

e5nrtA1

UID: 002080464

PDB

Range: A:3-384
PDB: 5NRT chain A(all domains)
UniProt: Q4WMJ8 (all domains)
Gene: gliJ

Molecule: Dipeptidase gliJ

3D Structure

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Related Domains

Browse other domains in Peptidase_M19 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPeptidase_M19(2002.1.1.59)

Ligands

in contact, ≤ 4 Å

Calcium ionCA
metal
Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01244Peptidase_M19

Membrane dipeptidase (Peptidase family M19)

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5NRT RCSB PDB: 5NRT PDBe: 5NRT UniProt: Q4WMJ8

Downloads

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