ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5tcgE1 - ECOD Domain | ECOD

ECOD/Domains/e5tcgE1

e5tcgE1

UID: 002080491

PDB

Range: E:9-265
PDB: 5TCG chain E(all domains)
UniProt: P9WFY1 (all domains)
Gene: trpA

Molecule: Tryptophan synthase alpha chain

3D Structure

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Related Domains

Browse other domains in Trp_syntA →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyTrp_syntA(2002.1.1.15)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Malonate Ion, Formic acid)

Malonate IonMLI
DrugBank DB02201
Formic acidFMT

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00290Trp_syntA

Tryptophan synthase alpha chain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5TCG RCSB PDB: 5TCG PDBe: 5TCG UniProt: P9WFY1

Downloads

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