ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5u90C1 - ECOD Domain | ECOD

ECOD/Domains/e5u90C1

e5u90C1

UID: 002080558

PDB

Range: C:26-526
PDB: 5U90 chain C(all domains)
UniProt: Q7S860 (all domains)
Gene: cao-1

Molecule: Carotenoid oxygenase 1

3D Structure

Loading viewer...

Related Domains

Browse other domains in RPE65 →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-propeller-like(5)

HH-groupbeta-propeller(5.1)

TT-group7-bladed(5.1.4)

FFamilyRPE65(5.1.4.15)

Ligands

in contact, ≤ 4 Å

ResveratrolSTL
drugDrugBank DB02709
COBALT (II) IONCO
metal

+ 1 additive (Dimethyl sulfoxide)

Pfam Families

Retinal pigment epithelial membrane protein

ClanCL0186Beta_propeller

External Links

ECOD PDB View: 5U90 RCSB PDB: 5U90 PDBe: 5U90 UniProt: Q7S860

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxide

DrugBank DB01093

Shown in the structure viewer. Drug annotations from DrugDomain.