ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5vgjG1 - ECOD Domain | ECOD

ECOD/Domains/e5vgjG1

e5vgjG1

UID: 002080702

PDB

Range: G:118-127,G:195-245
PDB: 5VGJ chain G(all domains)
UniProt: Q5G5U5 (all domains)
Gene: env

Molecule: 1FD6-V1V2-WITO

3D Structure

Loading viewer...

Related Domains

Browse other domains in IgG_binding_B →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupImmunoglobulin-binding domains(221.3)

TT-groupImmunoglobulin-binding domains(221.3.1)

FFamilyIgG_binding_B(221.3.1.1)

Pfam Families

PF01378IgG_binding_B

B domain

ClanCL0072Ubiquitin

External Links

ECOD PDB View: 5VGJ RCSB PDB: 5VGJ PDBe: 5VGJ UniProt: Q5G5U5

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure