ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gjkA1 - ECOD Domain | ECOD

ECOD/Domains/e5gjkA1

e5gjkA1

UID: 002080993

PDB

Range: A:446-539
PDB: 5GJK chain A(all domains)
UniProt: Q92922 (all domains)
Gene: SMARCC1

Molecule: SWI/SNF complex subunit SMARCC1

3D Structure

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Related Domains

Browse other domains in SWIRM →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHTH(101)

HH-groupHTH(101.1)

TT-groupThree-helical HTH(101.1.1)

FFamilySWIRM(101.1.1.28)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Phosphate ion)

GlycerinGOL
DrugBank DB09462
Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SWIRM domain

ClanCL0123HTH

External Links

ECOD PDB View: 5GJK RCSB PDB: 5GJK PDBe: 5GJK UniProt: Q92922

Downloads

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