ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gjkB1 - ECOD Domain | ECOD

ECOD/Domains/e5gjkB1

e5gjkB1

UID: 002080994

PDB

Range: B:182-249
PDB: 5GJK chain B(all domains)
UniProt: Q12824 (all domains)
Gene: SMARCB1

Molecule: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1

3D Structure

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Related Domains

Browse other domains in SNF5 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupFKBP-like(284)

HH-groupFKBP-like(284.1)

TT-groupWNK1 autoinhibitory domain(284.1.3)

FFamilySNF5(284.1.3.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Phosphate ion)

Phosphate ionPO4
DrugBank DB14523

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

SNF5 / SMARCB1 / INI1

External Links

ECOD PDB View: 5GJK RCSB PDB: 5GJK PDBe: 5GJK UniProt: Q12824

Downloads

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