ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5uosA1 - ECOD Domain | ECOD

ECOD/Domains/e5uosA1

e5uosA1

UID: 002081406

PDB

Range: A:-2-236
PDB: 5UOS chain A(all domains)
UniProt: Q9Y4U1 (all domains)
Gene: MMACHC

Molecule: Methylmalonic aciduria and homocystinuria type C protein

3D Structure

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Related Domains

Browse other domains in MMACHC →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupFMN-dependent nitroreductase-like(304.103)

TT-groupFMN-dependent nitroreductase-like(304.103.1)

FFamilyMMACHC(304.103.1.6)

Ligands

in contact, ≤ 4 Å

2-Phenylamino-Ethanesulfonic Acid171
drugDrugBank DB02283
GlutathioneGSH
drugDrugBank DB00143

Pfam Families

Methylmalonic aciduria and homocystinuria type C family

ClanCL0529FMN-dep-NRtase

External Links

ECOD PDB View: 5UOS RCSB PDB: 5UOS PDBe: 5UOS UniProt: Q9Y4U1

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Cobalamin

1-ethynyl-2,4-difluorobenzene8FS

within 5 Å only

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.