ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vb5A1 - ECOD Domain | ECOD

ECOD/Domains/e5vb5A1

e5vb5A1

UID: 002081442

PDB

Range: A:265-523
PDB: 5VB5 chain A(all domains)
UniProt: Q15596 (all domains)
Gene: NCOA2

Molecule: Nuclear receptor ROR-gamma, SRC2 chimera

3D Structure

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Related Domains

Browse other domains in Hormone_recep →

Classification

AArchitecturealpha arrays(a.6)

XX-groupNuclear receptor ligand-binding domain(188)

HH-groupNuclear receptor ligand-binding domain(188.1)

TT-groupNuclear receptor ligand-binding domain(188.1.1)

FFamilyHormone_recep(188.1.1.1)

Ligands

in contact, ≤ 4 Å

N-[(2R)-3-(4-{[3-(4-chlorophenyl)propanoyl]amino}phenyl)-1-(4-methylpiperidin-1-yl)-1-oxopropan-2-yl]-4-methylpentanamide92A
Sodium ionNA
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00104Hormone_recep

Ligand-binding domain of nuclear hormone receptor

External Links

ECOD PDB View: 5VB5 RCSB PDB: 5VB5 PDBe: 5VB5 UniProt: Q15596

Downloads

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