ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vbkB1 - ECOD Domain | ECOD

ECOD/Domains/e5vbkB1

e5vbkB1

UID: 002081446

PDB

Range: B:1-150
PDB: 5VBK chain B(all domains)
UniProt: A0A0P0E482 (all domains)

Molecule: Lectin

3D Structure

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Related Domains

Browse other domains in MytiLec →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupbeta-Trefoil(6)

HH-groupbeta-Trefoil(6.1)

TT-groupbeta-Trefoil(6.1.1)

FFamilyMytiLec(6.1.1.33)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF31214MytiLec

Alpha-D-galactose-binding lectin

ClanCL0066Trefoil

External Links

ECOD PDB View: 5VBK RCSB PDB: 5VBK PDBe: 5VBK UniProt: A0A0P0E482

Downloads

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