ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xg3A1 - ECOD Domain | ECOD

ECOD/Domains/e5xg3A1

e5xg3A1

UID: 002081640

PDB

Range: A:1-131,A:1032-1177
PDB: 5XG3 chain A(all domains)
UniProt: P51834 (all domains)
Gene: smc

Molecule: Chromosome partition protein Smc

3D Structure

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Related Domains

Browse other domains in SMC_N, AAA_29 →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupP-loop domains-like(2004)

HH-groupP-loop domains-related(2004.1)

TT-groupP-loop containing nucleoside triphosphate hydrolases(2004.1.1)

FFamilySMC_N, AAA_29(2004.1.1.481)

Ligands

in contact, ≤ 4 Å

Adenosine 5'-[gamma-thio]triphosphateAGS
drugDrugBank DB02930
COBALT (II) IONCO
metal
Magnesium ion

Pfam Families

RecF/RecN/SMC N terminal domain

ClanCL0023P-loop_NTPase

P-loop containing region of AAA domain

ClanCL0023P-loop_NTPase

External Links

ECOD PDB View: 5XG3 RCSB PDB: 5XG3 PDBe: 5XG3 UniProt: P51834

Downloads

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metal

Shown in the structure viewer. Drug annotations from DrugDomain.