ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5gveA4 - ECOD Domain | ECOD

ECOD/Domains/e5gveA4

e5gveA4

UID: 002082706

PDB

Range: A:0-169
PDB: 5GVE chain A(all domains)
UniProt: O95985 (all domains)
Gene: TOP3B

Molecule: DNA topoisomerase 3-beta-1

3D Structure

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Related Domains

Browse other domains in Toprim →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupToprim domain(2006.1.3)

FFamilyToprim(2006.1.3.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

Toprim domain

ClanCL0413Toprim-like

External Links

ECOD PDB View: 5GVE RCSB PDB: 5GVE PDBe: 5GVE UniProt: O95985

Downloads

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