ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nmiP1 - ECOD Domain | ECOD

ECOD/Domains/e5nmiP1

e5nmiP1

UID: 002083014

PDB

Range: P:261-379
PDB: 5NMI chain P(all domains)
UniProt: P00157 (all domains)
Gene: MT-CYB

Molecule: Cytochrome b

3D Structure

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Related Domains

Browse other domains in Cytochrom_B_C →

Classification

AArchitecturealpha bundles(a.7)

XX-groupa domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)(5068)

HH-groupa domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)(5068.1)

TT-groupa domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)(5068.1.1)

FFamilyCytochrom_B_C(5068.1.1.1)

Ligands

in contact, ≤ 4 Å

FerrohemeHEM
drugDrugBank DB18267
PhosphatidylethanolaminePEE
drugDrugBank DB04327

Shown in the structure viewer.

Pfam Families

PF00032Cytochrom_B_C

Cytochrome b(C-terminal)/b6/petD

External Links

ECOD PDB View: 5NMI RCSB PDB: 5NMI PDBe: 5NMI UniProt: P00157

Downloads

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Drug annotations from DrugDomain.