ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xh6A5 - ECOD Domain | ECOD

ECOD/Domains/e5xh6A5

e5xh6A5

UID: 002083569

PDB

Range: A:1-48,A:527-597,A:719-885
PDB: 5XH6 chain A(all domains)
UniProt: U2UMQ6 (all domains)
Gene: cas12a

Molecule: CRISPR-associated endonuclease Cpf1

3D Structure

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Related Domains

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Classification

AArchitecture—

XX-group—

HH-group—

TT-group—

FFamily—

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

External Links

ECOD PDB View: 5XH6 RCSB PDB: 5XH6 PDBe: 5XH6 UniProt: U2UMQ6

Downloads

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