ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e4dmrA1 - ECOD Domain | ECOD

ECOD/Domains/e4dmrA1

e4dmrA1

UID: 000020845

PDB

Range: A:626-780
PDB: 4DMR chain A(all domains)
UniProt: Q52675 (all domains)
Gene: dorA

Molecule: DMSO REDUCTASE

3D Structure

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Related Domains

Browse other domains in Molydop_binding →

Classification

AArchitecturebeta barrels(a.1)

XX-groupcradle loop barrel(1)

HH-groupRIFT-related(1.1)

TT-groupdouble psi(1.1.2)

FFamilyMolydop_binding(1.1.2.4)

Ligands

in contact, ≤ 4 Å

2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDEPGD
MOLYBDENUM(IV) ION4MO
metalwithin 5 Å only

+ 1 additive (Dimethyl sulfoxide)

Pfam Families

PF01568Molydop_binding

Molydopterin dinucleotide binding domain

ClanCL0199DPBB

External Links

ECOD PDB View: 4DMR RCSB PDB: 4DMR PDBe: 4DMR UniProt: Q52675

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

Dimethyl sulfoxideDMS

DrugBank DB01093within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.