ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g5oA1 - ECOD Domain | ECOD

ECOD/Domains/e5g5oA1

e5g5oA1

UID: 002084537

PDB

Range: A:29-373
PDB: 5G5O chain A(all domains)
UniProt: A9CB85 (all domains)

Molecule: LH3 HEXON-INTERLACING CAPSID PROTEIN

3D Structure

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Related Domains

Browse other domains in Adeno_E1B_55K →

Classification

AArchitecturebeta duplicates or obligate multimers(a.4)

XX-groupSingle-stranded right-handed beta-helix(207)

HH-groupPectin lyase-like(207.2)

TT-groupPectin lyase-like(207.2.1)

FFamilyAdeno_E1B_55K(207.2.1.5)

Ligands

in contact, ≤ 4 Å

Chloride ionCL

+ 2 additives (Acetate, Glycerin)

AcetateACT
DrugBank DB14511
GlycerinGOL

Pfam Families

PF01696Adeno_E1B_55K

Adenovirus EB1 55K protein / large t-antigen

ClanCL0268Pec_lyase-like

External Links

ECOD PDB View: 5G5O RCSB PDB: 5G5O PDBe: 5G5O UniProt: A9CB85

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.