ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wzqB2 - ECOD Domain | ECOD

ECOD/Domains/e5wzqB2

e5wzqB2

UID: 002084593

PDB

Range: B:248-631
PDB: 5WZQ chain B(all domains)
UniProt: G5ELM1 (all domains)
Gene: nagBb

Molecule: Alpha-N-acetylgalactosaminidase

3D Structure

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Related Domains

Browse other domains in DUF5696 →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyDUF5696(2002.1.1.190)

Ligands

in contact, ≤ 4 Å

Zinc ionZN
metal

+ 1 additive (Glycerin)

GlycerinGOL
DrugBank DB09462

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF18952DUF5696

Family of unknown function (DUF5696)

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5WZQ RCSB PDB: 5WZQ PDBe: 5WZQ UniProt: G5ELM1

Downloads

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