ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5x3tH1 - ECOD Domain | ECOD

ECOD/Domains/e5x3tH1

e5x3tH1

UID: 002084601

PDB

Range: H:1-135
PDB: 5X3T chain H(all domains)
UniProt: O53779 (all domains)
Gene: vapC26

Molecule: Ribonuclease VapC26

3D Structure

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Related Domains

Browse other domains in PIN →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupHAD domain-like(2006)

HH-groupHAD domain-related(2006.1)

TT-groupPIN domain-like(2006.1.4)

FFamilyPIN(2006.1.4.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PIN domain

ClanCL0280PIN

External Links

ECOD PDB View: 5X3T RCSB PDB: 5X3T PDBe: 5X3T UniProt: O53779

Downloads

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