ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5nb8C1 - ECOD Domain | ECOD

ECOD/Domains/e5nb8C1

e5nb8C1

UID: 002084668

PDB

Range: C:99-168
PDB: 5NB8 chain C(all domains)
UniProt: Q9QZQ5 (all domains)
Gene: Ccn3

Molecule: Protein NOV homolog

3D Structure

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Related Domains

Browse other domains in VWC →

Classification

AArchitecturefew secondary structure elements(a.19)

XX-groupFibronectin type I module-like(391)

HH-groupFibronectin type I module-like(391.1)

TT-groupVWC domain-related(391.1.2)

FFamilyVWC(391.1.2.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 2 additives (Glycerin, Imidazole)

GlycerinGOL
DrugBank DB09462
ImidazoleIMD
DrugBank DB03366

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

von Willebrand factor type C domain

ClanCL0451FnI-like

External Links

ECOD PDB View: 5NB8 RCSB PDB: 5NB8 PDBe: 5NB8 UniProt: Q9QZQ5

Downloads

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