ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5mp0D1 - ECOD Domain | ECOD

ECOD/Domains/e5mp0D1

e5mp0D1

UID: 002085199

PDB

Range: D:96-244
PDB: 5MP0 chain D(all domains)
UniProt: Q8IU60 (all domains)
Gene: DCP2

Molecule: m7GpppN-mRNA hydrolase

3D Structure

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Related Domains

Browse other domains in NUDIX →

Classification

AArchitecturea+b two layers(a.11)

XX-groupbeta-Grasp(221)

HH-groupNudix(221.4)

TT-groupNudix(221.4.1)

FFamilyNUDIX(221.4.1.1)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (1,2-ETHANEDIOL)

1,2-ETHANEDIOLEDO

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

NUDIX domain

ClanCL0261NUDIX

External Links

ECOD PDB View: 5MP0 RCSB PDB: 5MP0 PDBe: 5MP0 UniProt: Q8IU60

Downloads

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