ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vyjA1 - ECOD Domain | ECOD

ECOD/Domains/e5vyjA1

e5vyjA1

UID: 002085875

RepresentativePDB

Range: A:35-970
PDB: 5VYJ chain A(all domains)
UniProt: P04711 (all domains)
Gene: PEP1

Molecule: Phosphoenolpyruvate carboxylase

3D Structure

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Related Domains

Browse other domains in PEPcase →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyPEPcase(2002.1.1.17)

Ligands

in contact, ≤ 4 Å

GlycineGLY
drugDrugBank DB00145

+ 1 additive (Acetate)

AcetateACT
DrugBank DB14511

Shown in the structure viewer.

Pfam Families

PF00311PEPcase

Phosphoenolpyruvate carboxylase

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5VYJ RCSB PDB: 5VYJ PDBe: 5VYJ UniProt: P04711

Downloads

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Drug annotations from DrugDomain.