ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5meis1 - ECOD Domain | ECOD

ECOD/Domains/e5meis1

e5meis1

UID: 002086013

PDB

Range: s:6-174
PDB: 5MEI chain s(all domains)
UniProt: Q3E757 (all domains)
Gene: RPL11B

Molecule: 60S ribosomal protein L11-B

3D Structure

Loading viewer...

Related Domains

Browse other domains in Ribosomal_L5,Ribosomal_L5_C →

Classification

AArchitecturea+b two layers(a.11)

XX-groupRibosomal protein L5(882)

HH-groupRibosomal protein L5(882.1)

TT-groupRibosomal protein L5(882.1.1)

FFamilyRibosomal_L5,Ribosomal_L5_C(882.1.1.2)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal
osmium (III) hexammineOHX

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF00281Ribosomal_L5

Ribosomal protein L5

ClanCL0652S24e_L23_L15e

PF00673Ribosomal_L5_C

ribosomal L5P family C-terminus

External Links

ECOD PDB View: 5MEI RCSB PDB: 5MEI PDBe: 5MEI UniProt: Q3E757

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure