ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vp21f1 - ECOD Domain | ECOD

ECOD/Domains/e5vp21f1

e5vp21f1

UID: 002086353

PDB

Range: 1f:1-100
PDB: 5VP2 chain 1f(all domains)
UniProt: Q5SLP8 (all domains)
Gene: rpsF

Molecule: 30S ribosomal protein S6

3D Structure

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Related Domains

Browse other domains in Ribosomal_S6 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupAlpha-beta plaits(304)

HH-groupRibosomal protein S6(304.12)

TT-groupRibosomal protein S6(304.12.1)

FFamilyRibosomal_S6(304.12.1.1)

Ligands

in contact, ≤ 4 Å

Magnesium ionMG
metal

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF01250Ribosomal_S6

Ribosomal protein S6

External Links

ECOD PDB View: 5VP2 RCSB PDB: 5VP2 PDBe: 5VP2 UniProt: Q5SLP8

Downloads

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