ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5g48B1 - ECOD Domain | ECOD

ECOD/Domains/e5g48B1

e5g48B1

UID: 002086888

PDB

Range: B:246-374
PDB: 5G48 chain B(all domains)
UniProt: O25242 (all domains)
Gene: dnaN

Molecule: DNA POLYMERASE III SUBUNIT BETA

3D Structure

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Related Domains

Browse other domains in DNA_pol3_beta_3 →

Classification

AArchitecturea+b two layers(a.11)

XX-groupDNA clamp(227)

HH-groupDNA clamp(227.1)

TT-groupDNA clamp(227.1.1)

FFamilyDNA_pol3_beta_3(227.1.1.8)

Ligands

in contact, ≤ 4 Å

Diflunisal1FL
drugDrugBank DB00861

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF02768DNA_pol3_beta_3

DNA polymerase III beta subunit, C-terminal domain

ClanCL0060DNA_clamp

External Links

ECOD PDB View: 5G48 RCSB PDB: 5G48 PDBe: 5G48 UniProt: O25242

Downloads

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