ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5graA1 - ECOD Domain | ECOD

ECOD/Domains/e5graA1

e5graA1

UID: 002086909

PDB

Range: A:4-235
PDB: 5GRA chain A(all domains)
UniProt: Q5NN83 (all domains)
Gene: trmJ

Molecule: tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmJ

3D Structure

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Related Domains

Browse other domains in SpoU_methylase →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupalpha/beta knot(2488)

HH-groupalpha/beta knot(2488.1)

TT-groupalpha/beta knot(2488.1.1)

FFamilySpoU_methylase(2488.1.1.1)

Pfam Families

PF00588SpoU_methylase

SpoU rRNA Methylase family

ClanCL0098SPOUT

External Links

ECOD PDB View: 5GRA RCSB PDB: 5GRA PDBe: 5GRA UniProt: Q5NN83

Downloads

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