ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5sxuC1 - ECOD Domain | ECOD

ECOD/Domains/e5sxuC1

e5sxuC1

UID: 002087331

PDB

Range: C:10-202
PDB: 5SXU chain C(all domains)
UniProt: E0SJQ4 (all domains)
Gene: Dda3937_00520

Molecule: Gamma-aminobutyric-acid receptor subunit beta-1

3D Structure

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Related Domains

Browse other domains in Neur_chan_LBD →

Classification

AArchitecturebeta sandwiches(a.3)

XX-groupImmunoglobulin-like beta-sandwich(11)

HH-groupNicotinic receptor ligand binding domain-like(11.12)

TT-groupNicotinic receptor ligand binding domain-like(11.12.1)

FFamilyNeur_chan_LBD(11.12.1.1)

Ligands

in contact, ≤ 4 Å

3-AMINOPROPANE3CN
2-BROMOETHANOLBRJ
Chloride ionCL

+ 1 additive (2-(N-morpholino)ethanesulfonic acid)

Pfam Families

PF02931Neur_chan_LBD

Neurotransmitter-gated ion-channel ligand binding domain

ClanCL0974NLGIC_lig-bind

External Links

ECOD PDB View: 5SXU RCSB PDB: 5SXU PDBe: 5SXU UniProt: E0SJQ4

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

2-(N-morpholino)ethanesulfonic acidMES
DrugBank DB03814within 5 Å only

Shown in the structure viewer. Drug annotations from DrugDomain.