ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5vpnF2 - ECOD Domain | ECOD

ECOD/Domains/e5vpnF2

e5vpnF2

UID: 002087985

PDB

Range: F:106-243
PDB: 5VPN chain F(all domains)
UniProt: P0AC49 (all domains)
Gene: frdB

Molecule: Succinate dehydrogenase iron-sulfur subunit

3D Structure

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Related Domains

Browse other domains in Fer4_10 →

Classification

AArchitecturea+b two layers(a.11)

XX-group4Fe-4S ferredoxin(205)

HH-group4Fe-4S ferredoxin(205.1)

TT-group4Fe-4S ferredoxin(205.1.1)

FFamilyFer4_10(205.1.1.33)

Ligands

in contact, ≤ 4 Å

FE3-S4 CLUSTERF3S
Iron/sulfur clusterSF4

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF13237Fer4_10

4Fe-4S dicluster domain

ClanCL03444Fe-4S

External Links

ECOD PDB View: 5VPN RCSB PDB: 5VPN PDBe: 5VPN UniProt: P0AC49

Downloads

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