ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5wrvB1 - ECOD Domain | ECOD

ECOD/Domains/e5wrvB1

e5wrvB1

UID: 002088043

PDB

Range: B:9-162
PDB: 5WRV chain B(all domains)
UniProt: O76094 (all domains)
Gene: SRP72

Molecule: Signal recognition particle subunit SRP72

3D Structure

Loading viewer...

Related Domains

Browse other domains in SRP_TPR_like →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySRP_TPR_like(109.4.1.238)

Ligands

in contact, ≤ 4 Å

Sodium ionNA
metal

+ 3 additives (Acetate, Glycerin, Sulfate ion)

AcetateACT
DrugBank DB14511
GlycerinGOL

Pfam Families

PF17004SRP_TPR_like

Putative TPR-like repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5WRV RCSB PDB: 5WRV PDBe: 5WRV UniProt: O76094

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB09462

Sulfate ionSO4

DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.