ECODEvolutionary Classification of Protein Domains

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ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5wrwC1 - ECOD Domain | ECOD

ECOD/Domains/e5wrwC1

e5wrwC1

UID: 002088046

PDB

Range: C:9-138
PDB: 5WRW chain C(all domains)
UniProt: O76094 (all domains)
Gene: SRP72

Molecule: Signal recognition particle subunit SRP72

3D Structure

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Related Domains

Browse other domains in SRP_TPR_like →

Classification

AArchitecturealpha superhelices(a.9)

XX-groupRepetitive alpha hairpins(109)

HH-groupARM repeat(109.4)

TT-groupARM repeat(109.4.1)

FFamilySRP_TPR_like(109.4.1.238)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF17004SRP_TPR_like

Putative TPR-like repeat

ClanCL0020TPR

External Links

ECOD PDB View: 5WRW RCSB PDB: 5WRW PDBe: 5WRW UniProt: O76094

Downloads

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