ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5xdrA5 - ECOD Domain | ECOD

ECOD/Domains/e5xdrA5

e5xdrA5

UID: 002088077

PDB

Range: A:699-792
PDB: 5XDR chain A(all domains)
UniProt: O43143 (all domains)
Gene: DHX15

Molecule: Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15

3D Structure

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Related Domains

Browse other domains in OB_NTP_bind →

Classification

AArchitecturebeta barrels(a.1)

XX-groupOB-fold(2)

HH-groupNucleic acid-binding protein(2.1)

TT-groupNucleic acid-binding protein(2.1.1)

FFamilyOB_NTP_bind(2.1.1.37)

Ligands

in contact, ≤ 4 Å

Only buffers and crystallization additives.

+ 1 additive (Sulfate ion)

Sulfate ionSO4
DrugBank DB14546

Shown in the structure viewer. Drug annotations from DrugDomain.

Pfam Families

PF07717OB_NTP_bind

Oligonucleotide/oligosaccharide-binding (OB)-fold

ClanCL0021OB

External Links

ECOD PDB View: 5XDR RCSB PDB: 5XDR PDBe: 5XDR UniProt: O43143

Downloads

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