ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5w0nA2 - ECOD Domain | ECOD

ECOD/Domains/e5w0nA2

e5w0nA2

UID: 002088118

RepresentativePDB

Range: A:1142-1339
PDB: 5W0N chain A(all domains)
UniProt: Q5VYS8 (all domains)
Gene: TUT7

Molecule: Terminal uridylyltransferase 7

3D Structure

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Related Domains

Browse other domains in PAP_assoc →

Classification

AArchitecturealpha arrays(a.6)

XX-groupHhH/H2TH(102)

HH-groupSAM/DNA-glycosylase(102.1)

TT-groupPAP/OAS1 substrate-binding domain(102.1.3)

FFamilyPAP_assoc(102.1.3.1)

Ligands

in contact, ≤ 4 Å

5'-O-[(S)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]uridine2KH
Iodide ionIOD
[(2R,3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL (2R,3S,4R,5R)-5-(2,4-DIOXO-3,4-DIHYDROPYRIMIDIN-1(2H)-YL)-4-HYDROXY-2-(HYDROXYMETHYL)TETRAHYDROFURAN-3-YL HYDROGEN (S)-PHOSPHATEUPU

Pfam Families

PF03828PAP_assoc

Cid1 family poly A polymerase

External Links

ECOD PDB View: 5W0N RCSB PDB: 5W0N PDBe: 5W0N UniProt: Q5VYS8

Downloads

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Shown in the structure viewer. Drug annotations from DrugDomain.