ECODEvolutionary Classification of Protein Domains

Home Browse Search Download Help

About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

Quick Links

Browse Classification
Search
Download Data
Documentation
Privacy

Resources

Grishin Lab
UT Southwestern
RCSB PDB
AlphaFold DB
ecod.database@gmail.com

© 2014-2026 Grishin Lab / HHMI / UTSW

e5kozI1 - ECOD Domain | ECOD

ECOD/Domains/e5kozI1

e5kozI1

UID: 002088237

PDB

Range: I:139-455
PDB: 5KOZ chain I(all domains)
UniProt: Q6N0W9 (all domains)
Gene: cbbM

Molecule: Ribulose bisphosphate carboxylase

3D Structure

Loading viewer...

Related Domains

Browse other domains in RuBisCO_large →

Classification

AArchitecturea/b barrels(a.16)

XX-groupTIM beta/alpha-barrel(2002)

HH-groupTIM barrels(2002.1)

TT-groupTIM barrels(2002.1.1)

FFamilyRuBisCO_large(2002.1.1.1)

Ligands

in contact, ≤ 4 Å

2-CARBOXYARABINITOL-1,5-DIPHOSPHATECAP
Magnesium ionMG
metal

+ 1 additive (Carbonate ion)

Carbonate ionCO3

Pfam Families

PF00016RuBisCO_large

Ribulose bisphosphate carboxylase large chain, catalytic domain

ClanCL0036TIM_barrel

External Links

ECOD PDB View: 5KOZ RCSB PDB: 5KOZ PDBe: 5KOZ UniProt: Q6N0W9

Downloads

Download Domain PDB Download Domain FASTA Full PDB Structure

DrugBank DB14531

Shown in the structure viewer. Drug annotations from DrugDomain.