ECODEvolutionary Classification of Protein Domains

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About ECOD

ECOD (Evolutionary Classification of Protein Domains) is a hierarchical classification of protein domains based on evolutionary relationships. It combines automated sequence and structure analysis with manual curation.

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e5t9fB2 - ECOD Domain | ECOD

ECOD/Domains/e5t9fB2

e5t9fB2

UID: 002089756

PDB

Range: B:8-171
PDB: 5T9F chain B(all domains)
UniProt: I1MYY4 (all domains)
Gene: PDH1

Molecule: Prephenate dehydrogenase 1

3D Structure

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Related Domains

Browse other domains in PDH_N →

Classification

AArchitecturea/b three-layered sandwiches(a.17)

XX-groupRossmann-like(2003)

HH-groupRossmann-related(2003.1)

TT-groupNAD(P)-binding Rossmann-fold domains(2003.1.1)

FFamilyPDH_N(2003.1.1.27)

Ligands

in contact, ≤ 4 Å

Nicotinamide adenine dinucleotide phosphateNAP
drugDrugBank DB03461
TyrosineTYR
drugDrugBank DB00135

Shown in the structure viewer.

Pfam Families

Prephenate dehydrogenase, nucleotide-binding domain

ClanCL0063NADP_Rossmann

External Links

ECOD PDB View: 5T9F RCSB PDB: 5T9F PDBe: 5T9F UniProt: I1MYY4

Downloads

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Drug annotations from DrugDomain.